Model Repository
Model
File
Description
Reference
a 2-gene model
2gene.tsv
A two-gene network with mutual inhibitions and self-loops.
Bhattacharya, et al. 2011
the seesaw model
NetLand_seesaw.xml
The seesaw model has four genes. It is constructed to study the stem cell state transitions.
Shu, Jian, et al. 2013
A dynamic model in embryonic stem cell
BIOMD0000000209.xml
A dynamical model of lineage determination based upon a minimal circuit which contains the Oct4/Sox2/Nanog core as well its interactions with other key genes is discussed.
Chickarmane, et al. 2008
52-gene model
NetLand_52gene.xml
A stem cell developmental network with 52 genes to study stem cell fate transitions.
Wang, et al. 2008
More details can be found in Section 8 of
the user manual
.